Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796448.1_cds_XP_016449548.1_4345
CDS Infomation

[gene=LOC107774506] [db_xref=GeneID:107774506] [protein=IQ domain-containing protein IQM6-like] [protein_id=XP_016449548.1] [location=complement(join(24659..25345,25624..25725,25812..26051,26498..26585,26685..26773,26855..26920,27016..27130,27232..27704))] [gbkey=CDS]
Sequence

ATGGGAATAACATTTTCCTGTCCATTTGCCAATTTTGAGGATTTGGAAACTCGGGTTGAA
TCTTATTTGGTAAGAACATTAAGTTTAGGAAGTGATGATATGAGGACTGCATTACAGCCC
AGGAATTTCAATGACCAAATTACTAGAAAGTCAATCTTGAAATCTTTTGGTTCTGGAAAT
ATGATCCTTGAGGGAACTCTTACCTATAAAAGGAGGGAATTTGAGACCAAGATTGCACTA
AAGACTCTTGTATCCGATAAGGAAGATAAGAAGATCATTAGATCAGACATTATATGGAAC
AAAGAAGAAGTTTCTCCAAAATTGCATAACATGTCTGAGAAAGATACTAGGATGCTACCA
GCAGAGTGCGGAAAACGTAGAGATCAAGCTGCTGTAAAGTTGCAGAAGACATATAAAAGT
TTTCGTACCCGAAGACAGCTAGCTGATTGTGCTGTTCTAGTTGAGCAGAGATGGTGGAAG
CTATTAGATTCTGTTGAACTCAAGCACAGTTCTATATCATTCTTTGACACTGAGAAACCT
CAAACTGCTGTTTCTCGTTGGTCAAGAGCATTAACTAGAGCTGCTAAGGTGGGTAAAGGT
CTGTCCAAAGATGGAAAAGCGCGTAAGCTTGCTTTGCAACATTGGCTTGAAGCTATTGAT
CCTAGACATCGCTATGGTCATAATCTTCGATTTTATTACACCAAGTGGCTCCAAGCTGAC
AGTAAACAACCCTTCTTCTATTGGCTGGACATCGGTGAAGGTAAAGAAGTGAATCTTGAG
AGGTGTCCTAGATCAAAACTTCAACAAGAATGCATCAAGTATCTTGGTCCGATAGAGAGG
GAGGCATATGAAGTTGTCATTGTGGATGGAAAATTCATATACAAGCAGAGCAGAAGGCTG
CTAGACACAAGGGGAGGCCCTCCAGATGCAAAGTGGATCTTTGTGCTTAGCGTGTCCAAG
ATTTTGTATGTTGGGATGAAGCAAAAAGGCACATTTCAGCATTCCAGTTTCTTGGCTGGT
GGCGCCACATTGTCTGCGGGGAGATTCGTGGCGGAGGATGGTGTTATAAAGGCGGTCTGG
CCTCAGAGTGGACATTACCTCCCCACAGAGGAGAATTTTGAAGCATTCATGTTATTTCTT
AAGCAACATAATGTTGATGTCTCAGTTGTTCAGAAATTCACCAATTATGAGGAGGAAGCT
CCCTTTATCAGGAAGGAATGCGGTGTCAACATACGTAATAACTTATCAGCCCCAGATTTC
AGCCAATCCAATGAAGAGAGCAACCTCAAAAGCTCAGACACAAAGAAGATTGATTCTACT
AACAAGGATGACTCAAGGAAGTCCCGAATATCACGACCCAAAATTGCTGTTGAAATACCA
GAAAGGGAGGGCATTCTCGAGTTGTTTAAGGAGACTGGCCAAGAACAAAAAGACAGCATG
CTGCAGCCTGTGGAAACTCCAGCAGATGGATATGAAACACCAGATGAATATTTATCAGAT
ACGGAATGTTCAGTTTCAAAGAAGAATTTATTTGATCATGAAAATGAAGACGAGAACAAA
GAACCTGTCCCCGAAGAAAAGATAATCAAGAGAATAAATTCACATATAGGTAAAAAGTCA
TATCAATTGGCTCATCAATTTTCTTGTAGATGGACAACGGGAGTTGGACCTCGTATTGGA
TGCATGAGGGACTATCCATCCGAGCTCCAATTTCGCGTTATGGAGGAGGTGAATTTGTCT
CCAAGAACTGCATTTTCAACTCCCTCAAAATCTGCTCGTCGTTATACTCCTACCATCTTT
TCTAGAGAAGCAAATGAAGGCAAAAGACCTAGTTTTGAAGTAGTGGTATTCTCTGAATAA

Peptide Sequence

PEP ID

XP_016449548.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM6-like [Nicotiana tabacum]
Sequence

MGITFSCPFANFEDLETRVESYLVRTLSLGSDDMRTALQPRNFNDQITRKSILKSFGSGN
MILEGTLTYKRREFETKIALKTLVSDKEDKKIIRSDIIWNKEEVSPKLHNMSEKDTRMLP
AECGKRRDQAAVKLQKTYKSFRTRRQLADCAVLVEQRWWKLLDSVELKHSSISFFDTEKP
QTAVSRWSRALTRAAKVGKGLSKDGKARKLALQHWLEAIDPRHRYGHNLRFYYTKWLQAD
SKQPFFYWLDIGEGKEVNLERCPRSKLQQECIKYLGPIEREAYEVVIVDGKFIYKQSRRL
LDTRGGPPDAKWIFVLSVSKILYVGMKQKGTFQHSSFLAGGATLSAGRFVAEDGVIKAVW
PQSGHYLPTEENFEAFMLFLKQHNVDVSVVQKFTNYEEEAPFIRKECGVNIRNNLSAPDF
SQSNEESNLKSSDTKKIDSTNKDDSRKSRISRPKIAVEIPEREGILELFKETGQEQKDSM
LQPVETPADGYETPDEYLSDTECSVSKKNLFDHENEDENKEPVPEEKIIKRINSHIGKKS
YQLAHQFSCRWTTGVGPRIGCMRDYPSELQFRVMEEVNLSPRTAFSTPSKSARRYTPTIF
SREANEGKRPSFEVVVFSE

Transcript Sequence

Gene sequence data has not been registered.